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I am a computational biologist with an interest in the application of machine learning and deep learning to genomic data. Currently, I work as a Senior Genomic Data Scientist at Insitro.
Previously, I was a Senior Scientist in Deep Learning and Genomics at NVIDIA, and a postdoctoral researcher in the Departments of Genetics and Pathology at Stanford University.
My areas of expertise include functional genomics, next-generation sequencing, cancer genomics, machine learning and deep learning.
- Industry Resume (December 2021)
- Publications and Patents
- Peer Review
- Public speaking
- Contact Me
- Follow Me
Publications and Patents
Peer Review
Public speaking
I frequently give academic and industry talks on the topic of machine learning in genomics. Some recent talks:
2021
- Machine Learning Tools to Analyze Gene Expression and Regulation, National Cancer Institute, Bethesda, MD
- Accelerated Computing and Deep Learning for Single-cell Genomics, GPU Technology Conference (GTC)
- Deep learning Based Enhancement of Epigenomics Data with AtacWorks, MIT Department of Computer Science
- Accelerate and scale genomic analysis with open source analytics, Google
- GPU-Accelerated Single-Cell Genomics Analysis with RAPIDS, Chan Zuckerberg Institute (CZI)
- Accelerating Single-Cell Genomics with Machine Learning, University of Miami
- Machine Learning for Personalized Cancer Genomics, San Francisco State University
- Machine Learning in Bioinformatics, DNANexus
2020
- Accelerating Single-cell Genomics with Machine Learning and Deep Learning, Indian Institute of Technology (IIT) Delhi
- Real Time, GPU-Accelerated Analysis and Visualization in the Life Sciences (Invited keynote), Ken Kennedy Institute Virtual Data Science Conference, Rice University
- Panelist on Emerging Technologies in the Biotech Industry, Tri-I Biotech Club (Weill Cornell Medicine, Rockefeller University, and Memorial Sloan Kettering Cancer Center)
- Accelerated Computing and Deep Learning for Single-Cell Genomics, New York Genome Center
Contact Me
Email: avantikalal02 AT gmail DOT com